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.gitignore
vendored
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175
.gitignore
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# Byte-compiled / optimized / DLL files
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__pycache__/
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*.py[cod]
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*$py.class
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# C extensions
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*.so
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# Distribution / packaging
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.Python
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build/
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develop-eggs/
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dist/
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downloads/
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eggs/
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.eggs/
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lib/
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lib64/
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parts/
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sdist/
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var/
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wheels/
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share/python-wheels/
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*.egg-info/
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.installed.cfg
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*.egg
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MANIFEST
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# PyInstaller
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# Usually these files are written by a python script from a template
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# before PyInstaller builds the exe, so as to inject date/other infos into it.
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*.manifest
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*.spec
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# Installer logs
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pip-log.txt
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pip-delete-this-directory.txt
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# Unit test / coverage reports
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htmlcov/
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.tox/
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.nox/
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.coverage
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.coverage.*
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.cache
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nosetests.xml
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coverage.xml
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*.cover
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*.py,cover
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.hypothesis/
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.pytest_cache/
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cover/
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# Translations
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*.mo
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*.pot
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# Django stuff:
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*.log
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local_settings.py
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db.sqlite3
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db.sqlite3-journal
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# Flask stuff:
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instance/
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.webassets-cache
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# Scrapy stuff:
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.scrapy
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# Sphinx documentation
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docs/_build/
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# PyBuilder
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.pybuilder/
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target/
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# Jupyter Notebook
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.ipynb_checkpoints
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# IPython
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profile_default/
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ipython_config.py
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# pyenv
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# For a library or package, you might want to ignore these files since the code is
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# intended to run in multiple environments; otherwise, check them in:
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# .python-version
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# pipenv
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# According to pypa/pipenv#598, it is recommended to include Pipfile.lock in version control.
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# However, in case of collaboration, if having platform-specific dependencies or dependencies
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# having no cross-platform support, pipenv may install dependencies that don't work, or not
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# install all needed dependencies.
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#Pipfile.lock
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# poetry
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# Similar to Pipfile.lock, it is generally recommended to include poetry.lock in version control.
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# This is especially recommended for binary packages to ensure reproducibility, and is more
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# commonly ignored for libraries.
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# https://python-poetry.org/docs/basic-usage/#commit-your-poetrylock-file-to-version-control
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#poetry.lock
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# pdm
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# Similar to Pipfile.lock, it is generally recommended to include pdm.lock in version control.
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#pdm.lock
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# pdm stores project-wide configurations in .pdm.toml, but it is recommended to not include it
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# in version control.
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# https://pdm.fming.dev/latest/usage/project/#working-with-version-control
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.pdm.toml
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.pdm-python
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.pdm-build/
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# PEP 582; used by e.g. github.com/David-OConnor/pyflow and github.com/pdm-project/pdm
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__pypackages__/
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# Celery stuff
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celerybeat-schedule
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celerybeat.pid
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# SageMath parsed files
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*.sage.py
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# Environments
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.env
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.venv
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env/
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venv/
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ENV/
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env.bak/
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venv.bak/
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# Spyder project settings
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.spyderproject
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.spyproject
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# Rope project settings
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.ropeproject
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# mkdocs documentation
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/site
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# mypy
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.mypy_cache/
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.dmypy.json
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dmypy.json
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# Pyre type checker
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.pyre/
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# pytype static type analyzer
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.pytype/
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# Cython debug symbols
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cython_debug/
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# PyCharm
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# JetBrains specific template is maintained in a separate JetBrains.gitignore that can
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# be found at https://github.com/github/gitignore/blob/main/Global/JetBrains.gitignore
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# and can be added to the global gitignore or merged into this file. For a more nuclear
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# option (not recommended) you can uncomment the following to ignore the entire idea folder.
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.idea/
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# gitignore template for Jupyter Notebooks
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# website: http://jupyter.org/
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.ipynb_checkpoints
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*/.ipynb_checkpoints/*
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# IPython
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profile_default/
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ipython_config.py
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# Remove previous ipynb_checkpoints
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# git rm -r .ipynb_checkpoints/
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{"data":{"layout-restorer:data":{"main":{"dock":{"type":"tab-area","currentIndex":2,"widgets":["notebook:analisis.ipynb","csvviewer:data/articles.csv"]},"current":"csvviewer:data/articles.csv"},"down":{"size":0,"widgets":[]},"left":{"collapsed":false,"visible":true,"current":"filebrowser","widgets":["filebrowser","running-sessions","git-sessions","@jupyterlab/toc:plugin","extensionmanager.main-view"],"widgetStates":{"jp-running-sessions":{"sizes":[0.16666666666666666,0.16666666666666666,0.16666666666666666,0.16666666666666666,0.16666666666666666,0.16666666666666666],"expansionStates":[false,false,false,false,false,false]},"extensionmanager.main-view":{"sizes":[0.5,0.5],"expansionStates":[false,false]}}},"right":{"collapsed":true,"visible":true,"widgets":["jp-property-inspector","debugger-sidebar"],"widgetStates":{"jp-debugger-sidebar":{"sizes":[0.2,0.2,0.2,0.2,0.2],"expansionStates":[false,false,false,false,false]}}},"relativeSizes":[0.1663353214049039,0.8336646785950961,0],"top":{"simpleVisibility":true}},"docmanager:recents":{"opened":[{"path":"data","contentType":"directory","root":"/home/jovyan"},{"path":"data/articles.csv","contentType":"file","factory":"CSVTable","root":"/home/jovyan"},{"path":"","contentType":"directory","root":"/home/jovyan"},{"path":"analisis.ipynb","contentType":"notebook","factory":"Notebook","root":"/home/jovyan"}],"closed":[]},"file-browser-filebrowser:cwd":{"path":"data"},"csvviewer:data/articles.csv":{"data":{"path":"data/articles.csv","factory":"CSVTable"}},"notebook:analisis.ipynb":{"data":{"path":"analisis.ipynb","factory":"Notebook"}}},"metadata":{"id":"default"}}
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12
Dockerfile
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12
Dockerfile
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FROM quay.io/jupyter/scipy-notebook
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# Install in the default python3 environment
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RUN pip install --no-cache-dir 'flake8' && \
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fix-permissions "${CONDA_DIR}" && \
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fix-permissions "/home/${NB_USER}"
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# Install from the requirements.txt file
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COPY --chown=${NB_UID}:${NB_GID} requirements.txt /tmp/
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RUN pip install --no-cache-dir --requirement /tmp/requirements.txt && \
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fix-permissions "${CONDA_DIR}" && \
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fix-permissions "/home/${NB_USER}"
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README.md
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README.md
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# how-gen-ai-affects-researchers
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import pandas as pd
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import seaborn as sns
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from wordcloud import WordCloud
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import matplotlib.pyplot as plt
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from IPython.display import display, Markdown
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from collections import Counter
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from itertools import islice
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articles = pd.read_csv('data/articles.csv')# how-gen-ai-affects-researchers
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## Most common tags
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man_tags = articles['Manual Tags'].dropna().str.lower()
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auto_tags = articles['Automatic Tags'].dropna().str.lower()
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tags = man_tags.str.split(';').explode().str.strip().to_list() + auto_tags.str.split(';').explode().str.strip().to_list()
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c = Counter(tags)
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text = '## Top 50 common tags:\n\n'
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for val, key in c.most_common(50):
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text += f"1. {val} ({key})\n"
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display(Markdown(text))
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wc = WordCloud(scale=8, background_color="white").generate_from_frequencies(c)
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plt.figure(figsize=(10,10))
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plt.imshow(wc)
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plt.axis("off")
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plt.show()
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## Title
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titles = articles['Title'].dropna().str.lower()
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tc = WordCloud(scale=8, background_color="white").generate(" ".join(titles))
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plt.figure(figsize=(10,10))
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plt.imshow(tc)
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plt.axis("off")
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plt.show()
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---
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top_title = "### Top 50 phrase in title\n\n"
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tc_words = dict(islice(dict(sorted(WordCloud(scale=8, background_color="white").process_text(" ".join(titles)).items(), key=lambda item: item[1], reverse=True)).items(), 50))
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for word, freq in tc_words.items():
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top_title += f"1. {word} ({freq})\n"
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display(Markdown(top_title))
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---
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## Abstract
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abstracts = articles['Abstract Note'].dropna().str.lower()
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ac = WordCloud(scale=8, background_color="white").generate(" ".join(abstracts))
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plt.figure(figsize=(10,10))
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plt.imshow(ac)
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plt.axis("off")
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plt.show()
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---
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top_abstract = "### Top 50 phrase in abstract\n\n"
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ac_words = dict(islice(dict(sorted(WordCloud(scale=8, background_color="white").process_text(" ".join(abstracts)).items(), key=lambda item: item[1], reverse=True)).items(), 50))
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for word, freq in ac_words.items():
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top_abstract += f"1. {word} ({freq})\n"
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display(Markdown(top_abstract))
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---
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## Journal
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pub = articles['Publication Title'].dropna().str.lower()
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pc = WordCloud(scale=8, background_color="white").generate(" ".join(pub))
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plt.figure(figsize=(10,10))
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plt.imshow(pc)
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plt.axis("off")
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plt.show()
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---
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top_pub = "### Top 50 phrase in publication title\n\n"
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pc_words = dict(islice(dict(sorted(WordCloud(scale=8, background_color="white").process_text(" ".join(pub)).items(), key=lambda item: item[1], reverse=True)).items(), 50))
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for word, freq in pc_words.items():
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top_pub += f"1. {word} ({freq})\n"
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display(Markdown(top_pub))
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1128
data/articles.csv
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1128
data/articles.csv
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File diff suppressed because one or more lines are too long
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requirements.txt
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requirements.txt
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nltk==3.9.1
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wordcloud==1.9.4
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